STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBE2L6Ubiquitin conjugating enzyme E2 L6; Belongs to the ubiquitin-conjugating enzyme family. (153 aa)    
Predicted Functional Partners:
UBE2V1
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.992
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
 0.984
RPS27A
Ubiquitin-like domain-containing protein.
   
 0.977
UBB
Ubiquitin B.
   
 0.972
UBE2L3
Ubiquitin conjugating enzyme E2 L3; Belongs to the ubiquitin-conjugating enzyme family.
  
 
0.905
ARIH1
RBR-type E3 ubiquitin transferase.
   
 0.895
ISG15
ISG15 ubiquitin like modifier.
   
 0.893
G3SS82_LOXAF
Uncharacterized protein.
    
 0.843
G3U9C8_LOXAF
Ubiquitin-like domain-containing protein.
   
 0.788
RNF217
RBR-type E3 ubiquitin transferase.
   
 0.757
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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