STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM7Tripartite motif containing 7. (305 aa)    
Predicted Functional Partners:
GYG1
Glycogenin 1.
   
 
 0.911
GYG2
Glycogenin 2.
   
 
 0.820
TRIM52
Tripartite motif containing 52.
 
   
 0.738
ARMC12
Armadillo repeat containing 12.
    
 
 0.651
TRIM69
Tripartite motif containing 69.
 
    
 0.624
BBOX1
Gamma-butyrobetaine hydroxylase 1.
      
 0.576
INIP
INTS3 and NABP interacting protein.
      
 0.553
BRMS1
BRMS1 transcriptional repressor and anoikis regulator.
    
 
 0.537
KLHL40
Kelch like family member 40.
   
 
 0.515
AKTIP
AKT interacting protein.
    
 
 0.471
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.