STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCN1GCN1 activator of EIF2AK4. (2671 aa)    
Predicted Functional Partners:
ABCF3
ATP binding cassette subfamily F member 3.
   
 
 0.983
RPL19
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
 
 
   0.929
G3UDA4_LOXAF
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
 
 
   0.927
DRG2
Developmentally regulated GTP binding protein 2.
   
 
 0.925
RPS13
Ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
   
 
 0.892
RPS9
Ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.
   
 
 0.877
RPS3
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 
 0.873
EEF2
Eukaryotic translation elongation factor 2.
   
 
 0.871
RACK1
Receptor for activated C kinase 1.
   
 
 0.870
RPS5
Ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.
   
 
 0.862
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.