STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRP8LDL receptor related protein 8. (909 aa)    
Predicted Functional Partners:
RELN
Reelin.
    
 0.965
DAB1
DAB adaptor protein 1.
    
 0.925
APOE
Apolipoprotein E.
    
 0.814
PCSK9
Proprotein convertase subtilisin/kexin type 9.
    
 0.760
APOB
Apolipoprotein B.
    
 0.670
LDLRAP1
Low density lipoprotein receptor adaptor protein 1.
    
 0.659
VLDLR
Very low density lipoprotein receptor.
  
 
 
0.617
ITSN2
Intersectin 2.
    
 0.604
G3U095_LOXAF
Uncharacterized protein.
    
 0.604
AGRN
Agrin.
    
 0.592
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.