STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF25Ring finger protein 25. (452 aa)    
Predicted Functional Partners:
NUP214
Nucleoporin 214.
      
 0.611
LSM7
LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.
      
 0.579
ADGRG7
Adhesion G protein-coupled receptor G7; Belongs to the G-protein coupled receptor 2 family.
      
 0.527
ABI2
Abl interactor 2.
      
 0.527
NDUFS5
NADH:ubiquinone oxidoreductase subunit S5.
      
 0.526
GIT2
GIT ArfGAP 2.
      
 0.522
MINK1
Misshapen like kinase 1.
      
 0.521
PSMA6
Proteasome subunit alpha type.
      
 0.517
ZNF408
Zinc finger protein 408.
   
    0.513
UBE2D3
Ubiquitin conjugating enzyme E2 D3; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.500
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.