STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDR70WD repeat domain 70. (651 aa)    
Predicted Functional Partners:
CWC22
CWC22 spliceosome associated protein homolog.
   
 0.901
DHX38
DEAH-box helicase 38.
 
 
 0.890
CDC40
Cell division cycle 40.
   
  0.885
PPWD1
Peptidylprolyl isomerase domain and WD repeat containing 1.
   
 0.826
PPIL1
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
 0.822
YJU2
YJU2 splicing factor homolog.
    
  0.809
CWC25
CWC25 spliceosome associated protein homolog.
    
  0.809
WDR25
WD_REPEATS_REGION domain-containing protein.
   
  0.776
PRPF19
Pre-mRNA processing factor 19.
   
 
 0.765
OTX1
Orthodenticle homeobox 1.
      
 0.752
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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