STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPEF2Sperm flagellar 2. (1664 aa)    
Predicted Functional Partners:
CCDC40
Coiled-coil domain containing 40.
    
 0.690
LRGUK
Leucine rich repeats and guanylate kinase domain containing.
   
 0.655
SPAG6
Sperm associated antigen 6.
   
 0.625
LRRC40
Leucine rich repeat containing 40.
    
 0.596
EFCAB6
EF-hand calcium binding domain 6.
   
  0.594
DNAI1
Dynein axonemal intermediate chain 1.
   
  
 0.588
ADK
Adenosine kinase.
    
 
 0.586
DNAI2
Dynein axonemal intermediate chain 2.
      
 0.581
CIB4
Calcium and integrin binding family member 4.
    
 0.569
SPAG17
Sperm associated antigen 17.
    
 
 0.565
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.