STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM33Transmembrane protein 33. (250 aa)    
Predicted Functional Partners:
SLC30A9
Solute carrier family 30 member 9.
 
 
  
 0.594
SEC13
SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family.
      
 0.574
BEND4
BEN domain containing 4.
      
 0.527
CUNH4orf22
Uncharacterized protein.
      
 0.524
NUP133
Nucleoporin 133.
    
 
 0.515
RNF26
Ring finger protein 26.
    
 
 0.501
CHORDC1
Cysteine and histidine rich domain containing 1.
   
  
 0.481
TMED1
Transmembrane p24 trafficking protein 1.
   
  
 0.475
AHCTF1
AT-hook containing transcription factor 1.
      
 0.459
TMEM43
Transmembrane protein 43.
      
 0.456
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.