STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDE1APhosphodiesterase. (543 aa)    
Predicted Functional Partners:
PDE1B
Phosphodiesterase.
  
  
0.950
PDE1C
Phosphodiesterase.
  
 
 
0.947
CALM3
Calmodulin 3; Belongs to the calmodulin family.
    
 0.934
CALML5
Calmodulin like 5.
    
 0.934
CALML3
Calmodulin like 3; Belongs to the calmodulin family.
    
 0.934
CALML4
Calmodulin like 4.
    
 0.927
ENPP3
Ectonucleotide pyrophosphatase/phosphodiesterase 3.
     
 0.912
GNB3
G protein subunit beta 3.
     
 0.912
ENPP1
Ectonucleotide pyrophosphatase/phosphodiesterase 1.
     
 0.912
APRT
Adenine phosphoribosyltransferase.
     
 0.910
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.