STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANKIB1RBR-type E3 ubiquitin transferase. (1092 aa)    
Predicted Functional Partners:
GATAD1
GATA zinc finger domain containing 1.
 
 
  
 0.703
RNF216
Ring finger protein 216.
    
 0.607
TRIP12
Thyroid hormone receptor interactor 12.
   
 
 0.595
BIRC7
Baculoviral IAP repeat containing 7.
    
 0.586
CWF19L2
CWF19 like cell cycle control factor 2.
      
 0.582
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.546
UBE2L6
Ubiquitin conjugating enzyme E2 L6; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.535
UBE2L5
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.535
BIRC6
Baculoviral IAP repeat containing 6.
    
 0.515
NEDD8
NEDD8 ubiquitin like modifier.
    
 0.507
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.