STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEP290Centrosomal protein 290. (2325 aa)    
Predicted Functional Partners:
IQCB1
IQ motif containing B1.
    
 
 0.902
CCP110
Centriolar coiled-coil protein 110.
    
 
 0.875
NPHP1
Nephrocystin 1.
   
 0.759
PCM1
Pericentriolar material 1.
   
 
 0.744
RPGRIP1L
RPGRIP1 like.
   
 0.744
TMEM67
Transmembrane protein 67.
   
  
 0.734
B9D1
B9 domain containing 1.
   
  
 0.734
MKS1
MKS transition zone complex subunit 1.
    
 
 0.731
G3UMY7_LOXAF
Uncharacterized protein.
   
 0.725
WDR19
WD repeat domain 19.
      
 0.723
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.