STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C16orf71Chromosome 16 open reading frame 71. (488 aa)    
Predicted Functional Partners:
CLUL1
CLb domain-containing protein.
  
     0.468
MLIP
Muscular LMNA interacting protein.
  
     0.456
TRERF1
Transcriptional regulating factor 1.
  
     0.435
ZACN
Zinc activated ion channel; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
     0.430
TM4SF18
Transmembrane 4 L six family member 18.
  
     0.420
ZNF862
Zinc finger protein 862.
  
     0.413
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.