STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZCCHC7Uncharacterized protein. (203 aa)    
Predicted Functional Partners:
MTREX
Mtr4 exosome RNA helicase.
   
 
 0.949
TENT4A
Terminal nucleotidyltransferase 4A.
   
 
 0.866
PAPD5
Uncharacterized protein.
   
 
 0.765
G3T4R7_LOXAF
NTP_transf_2 domain-containing protein.
   
 
 0.765
PAPOLG
Poly(A) polymerase gamma.
      
 0.723
EXOSC10
Exosome component 10.
   
 
 0.706
SKIV2L
Ski2 like RNA helicase.
   
 
 0.680
EXOSC9
Exosome component 9.
   
 
 0.636
EXOSC1
Exosome component 1.
   
  
 0.636
C1D
C1D nuclear receptor corepressor.
   
 
 0.617
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.