STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SALL3Spalt like transcription factor 3. (1304 aa)    
Predicted Functional Partners:
NANOG
Homeobox domain-containing protein.
   
 0.631
POU5F1
POU domain protein.
   
 0.550
G3UHL2_LOXAF
POU-specific domain-containing protein.
   
 0.550
RBBP4
RB binding protein 4, chromatin remodeling factor.
   
 0.549
RBBP7
RB binding protein 7, chromatin remodeling factor.
   
 0.549
ABCD4
ATP binding cassette subfamily D member 4.
      
 0.543
COQ2
4-hydroxybenzoate polyprenyltransferase, mitochondrial; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of coenzyme Q (CoQ) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate.
      
 0.527
KCNJ6
Potassium voltage-gated channel subfamily J member 6.
      
 0.524
GATAD2B
GATA zinc finger domain containing 2B.
    
 0.499
ARID4A
AT-rich interaction domain 4A.
    
 
 0.494
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.