STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MBD6Methyl-CpG binding domain protein 6. (998 aa)    
Predicted Functional Partners:
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.686
RANBP2
RAN binding protein 2.
    
 0.481
G3SXI4_LOXAF
Uncharacterized protein.
  
     0.473
G3UFG8_LOXAF
Fibronectin type-III domain-containing protein.
  
     0.464
KDM6A
Lysine demethylase 6A.
   
 0.441
SIGLEC10
Uncharacterized protein.
  
     0.435
CCDC136
Coiled-coil domain containing 136.
  
 
  0.433
ACRBP
Acrosin binding protein.
  
     0.430
ZNF106
Zinc finger protein 106.
  
  0.422
ASH2L
ASH2 like, histone lysine methyltransferase complex subunit.
    
 0.412
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.