STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RHPN2Rhophilin Rho GTPase binding protein 2. (686 aa)    
Predicted Functional Partners:
CHMP4C
Charged multivesicular body protein 4C.
   
 0.558
LOC100655308
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
   
 0.558
CHMP4B
Charged multivesicular body protein 4B.
   
 0.558
MYNN
Myoneurin.
    
 
 0.538
RHOB
Ras homolog family member B.
    
 0.515
RHOA
Ras homolog family member A.
    
 0.515
RHOC
Uncharacterized protein.
    
 0.515
CHMP5
Charged multivesicular body protein 5.
    
 0.507
VPS4B
Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.
   
 0.476
VPS4A
Uncharacterized protein; Belongs to the AAA ATPase family.
   
 0.476
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.