STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3TBM5_LOXAFWD_REPEATS_REGION domain-containing protein. (142 aa)    
Predicted Functional Partners:
CUL7
Cullin 7; Belongs to the cullin family.
   
 0.981
RBX1
Ring-box 1.
    
 0.954
CUL1
Cullin 1; Belongs to the cullin family.
    
 0.878
SKP1
S-phase kinase associated protein 1; Belongs to the SKP1 family.
    
 0.832
G3U9C6_LOXAF
Uncharacterized protein; Belongs to the SKP1 family.
    
 0.832
G3ULX5_LOXAF
Uncharacterized protein; Belongs to the SKP1 family.
    
 0.832
COQ9
Ubiquinone biosynthesis protein; Lipid-binding protein involved in the biosynthesis of coenzyme Q, also named ubiquinone, an essential lipid-soluble electron transporter for aerobic cellular respiration.
    
 0.738
CUL3
Cullin 3; Belongs to the cullin family.
    
 0.688
FBXO4
F-box protein 4.
    
 0.596
RNF7
Ring finger protein 7.
    
 0.593
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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