STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NAGAAlpha-galactosidase. (411 aa)    
Predicted Functional Partners:
HEXA
Beta-hexosaminidase.
   
 
 0.935
HEXB
Beta-hexosaminidase.
   
 
 0.932
B3GALNT1
Hexosyltransferase.
   
 
 0.906
LOC100653877
Hexosyltransferase.
   
 
 0.906
GBGT1
Globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 (FORS blood group).
     
 0.900
BCKDHA
2-oxoisovalerate dehydrogenase subunit alpha; The branched-chain alpha-keto dehydrogenase complex catalyzes the overall conversion of alpha-keto acids to acyl-CoA and CO(2). It contains multiple copies of three enzymatic components: branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3).
      
 0.677
CCNJ
Cyclin J; Belongs to the cyclin family.
      
 0.658
GBA3
Glucosylceramidase beta 3 (gene/pseudogene); Belongs to the glycosyl hydrolase 1 family.
      
 0.654
ARMC10
Arm_2 domain-containing protein.
      
 0.552
GUSB
Beta-glucuronidase; Plays an important role in the degradation of dermatan and keratan sulfates; Belongs to the glycosyl hydrolase 2 family.
      
 0.547
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.