STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NUFIP1Nuclear FMR1 interacting protein 1. (494 aa)    
Predicted Functional Partners:
ZNHIT6
Zinc finger HIT-type containing 6.
   
 0.717
PIH1D1
PIH1 domain containing 1.
    
 0.698
ZNHIT3
HIT-type domain-containing protein.
    
 
 0.671
NOP56
NOP56 ribonucleoprotein.
    
 0.525
RPAP3
RNA polymerase II associated protein 3.
   
 0.520
NOP58
NOP58 ribonucleoprotein.
   
 0.519
TAF9
TATA-box binding protein associated factor 9.
    
  0.456
TONSL
Tonsoku like, DNA repair protein.
    
  0.455
ERCC6
ERCC excision repair 6, chromatin remodeling factor.
   
  0.435
CDC73
Cell division cycle 73.
    
  0.431
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.