STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5orf22Chromosome 5 open reading frame 22. (438 aa)    
Predicted Functional Partners:
TPGS2
Tubulin polyglutamylase complex subunit 2.
      
 0.521
LIX1
Limb and CNS expressed 1.
   
 0.507
LIX1L
Limb and CNS expressed 1 like.
   
 0.504
C1orf109
Chromosome 1 open reading frame 109.
   
    0.503
UGT3A2
UDP-glucuronosyltransferase; Belongs to the UDP-glycosyltransferase family.
   
    0.497
G3TLL1_LOXAF
Uncharacterized protein.
   
    0.497
CWC25
CWC25 spliceosome associated protein homolog.
   
    0.493
TRMT13
tRNA methyltransferase 13 homolog.
   
  
 0.487
RUBCNL
Rubicon like autophagy enhancer.
   
   0.468
SAYSD1
SAYSVFN motif domain containing 1.
      
 0.461
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.