STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM2D1TM2 domain containing 1. (202 aa)    
Predicted Functional Partners:
TM2D2
TM2 domain containing 2.
   
  
 0.727
TRDMT1
tRNA aspartic acid methyltransferase 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
      
 0.589
C2CD2
C2 calcium dependent domain containing 2.
      
 0.584
FAM92A
Family with sequence similarity 92 member A.
      
 0.579
NHLRC2
NHL repeat containing 2.
      
 0.523
IQGAP3
IQ motif containing GTPase activating protein 3.
      
 0.516
LAMTOR3
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 3.
      
 0.516
LAMTOR2
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.
   
  
 0.485
FBXO4
F-box protein 4.
   
  
 0.476
NPRL2
NPR2 like, GATOR1 complex subunit.
   
  
 0.468
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.