STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFSWAPSplicing factor SWAP. (872 aa)    
Predicted Functional Partners:
SF3A3
Splicing factor 3a subunit 3.
      
 0.647
SRRM1
Serine and arginine repetitive matrix 1.
   
 
 0.621
SRRM4
Serine/arginine repetitive matrix 4.
      
 0.607
SF3A2
Splicing factor 3a subunit 2.
      
 0.574
ESRP1
Epithelial splicing regulatory protein 1.
      
 0.533
BORCS8
Uncharacterized protein.
      
 0.515
SREK1
Splicing regulatory glutamic acid and lysine rich protein 1.
   
  
 0.406
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.