STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROBO4Roundabout guidance receptor 4. (1006 aa)    
Predicted Functional Partners:
SLIT2
Slit guidance ligand 2.
   
 0.904
SLIT1
Slit guidance ligand 1.
   
 0.863
SLIT3
Uncharacterized protein.
   
 0.794
G3UKJ5_LOXAF
Uncharacterized protein.
   
 0.794
NYX
Nyctalopin.
   
 0.655
CLDN5
Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.
   
  
 0.618
MMRN2
Multimerin 2.
   
 
 0.604
UNC5B
Unc-5 netrin receptor B.
     
0.578
LRRC3B
Leucine rich repeat containing 3B.
   
 0.565
LRTM2
Leucine rich repeats and transmembrane domains 2.
   
 0.565
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.