STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBA5Ubiquitin like modifier activating enzyme 5. (404 aa)    
Predicted Functional Partners:
UFC1
Ubiquitin-fold modifier-conjugating enzyme 1; E2-like enzyme which forms an intermediate with UFM1 via a thioester linkage.
  
 
 
 0.977
G3UH06_LOXAF
Uncharacterized protein.
   
 
 0.973
BIRC6
Baculoviral IAP repeat containing 6.
  
 0.966
TRIP12
Thyroid hormone receptor interactor 12.
    
 0.960
UBE2V1
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 
 0.955
GABARAPL2
GABA type A receptor associated protein like 2.
   
 0.919
UFL1
UFM1 specific ligase 1.
   
 
 0.848
UBA3
Ubiquitin like modifier activating enzyme 3.
     
0.825
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
 0.819
UBE2F
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.790
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.