STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CNPY2Saposin B-type domain-containing protein. (182 aa)    
Predicted Functional Partners:
CNPY4
Canopy FGF signaling regulator 4.
      
 0.589
CNPY3
Canopy FGF signaling regulator 3.
      
 0.575
MYLIP
Myosin regulatory light chain interacting protein.
    
 
 0.549
RNF10
Ring finger protein 10.
      
 0.544
RABGGTB
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
      
 0.529
MYLPF
Myosin light chain, phosphorylatable, fast skeletal muscle.
      
 0.522
NME6
Nucleoside diphosphate kinase.
   
  
 0.517
CS
Citrate synthase; Belongs to the citrate synthase family.
 
      0.515
TBCK
TBC1 domain containing kinase.
      
 0.513
FEZ1
Fasciculation and elongation protein zeta 1.
      
 0.481
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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