STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XIRP2Xin actin binding repeat containing 2. (3417 aa)    
Predicted Functional Partners:
G3UKE0_LOXAF
Uncharacterized protein.
 
      0.899
CSRP3
Cysteine and glycine rich protein 3.
   
 
 0.676
WDR18
WD repeat domain 18.
   
 0.626
MYL1
Myosin light chain 1.
   
 0.617
TEX10
Testis expressed 10.
   
 0.588
PES1
Pescadillo ribosomal biogenesis factor 1.
   
 0.571
ACTN2
Actinin alpha 2.
   
 0.530
MYOZ2
Myozenin 2.
  
  
 0.508
TRIOBP
PH domain-containing protein.
   
 
 0.461
BOP1
Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.454
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.