STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBFARibosome binding factor A. (328 aa)    
Predicted Functional Partners:
METTL15
Methyltransferase like 15.
    
 
 0.837
MRPS21
Mitochondrial ribosomal protein S21.
   
   0.829
MRPS7
Mitochondrial ribosomal protein S7.
    
   0.808
MRPS11
Mitochondrial ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family.
    
   0.808
KIAA0100
KIAA0100.
   
 
 0.725
MRPS26
Mitochondrial ribosomal protein S26.
   
   0.674
MRPS15
Mitochondrial ribosomal protein S15; Belongs to the universal ribosomal protein uS15 family.
    
 
 0.642
DAP3
Death associated protein 3.
    
 
 0.639
MRPS23
Mitochondrial ribosomal protein S23.
   
   0.630
MRPS33
Mitochondrial ribosomal protein S33.
   
   0.630
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.