STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCTS1Malignant T-cell-amplified sequence. (181 aa)    
Predicted Functional Partners:
DENR
Density-regulated protein; Belongs to the DENR family.
   
 
 0.989
OLA1
Obg-like ATPase 1; Hydrolyzes ATP, and can also hydrolyze GTP with lower efficiency. Has lower affinity for GTP.
 
 
  
 0.909
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.890
G3TRE8_LOXAF
Ubiquitin-like domain-containing protein.
   
 
 0.835
EIF1B
Eukaryotic translation initiation factor 1B.
   
 
 0.814
EIF1
SUI1 domain-containing protein.
   
 
 0.814
RPS28
Ribosomal protein S28.
    
  0.762
EIF2D
Eukaryotic translation initiation factor 2D.
    
0.761
RPS9
Ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.
   
 0.739
RPS8
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
  0.733
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.