STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GPR179G_PROTEIN_RECEP_F3_4 domain-containing protein. (905 aa)    
Predicted Functional Partners:
CABP4
Uncharacterized protein.
    
 
 0.671
LRIT3
Leucine rich repeat, Ig-like and transmembrane domains 3.
     
 0.669
NYX
Nyctalopin.
     
 0.661
GRM6
Glutamate metabotropic receptor 6.
      
 0.621
GNAT1
G protein subunit alpha transducin 1.
    
 0.582
CACNA1F
Calcium voltage-gated channel subunit alpha1 F.
     
 0.535
TRPM1
Transient receptor potential cation channel subfamily M member 1.
      
 0.527
G3TC70_LOXAF
Uncharacterized protein.
    
   0.497
PDE6B
Phosphodiesterase.
      
 0.455
GNB5
G protein subunit beta 5.
    
 0.451
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.