STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3TEW0_LOXAFCor1 domain-containing protein. (257 aa)    
Predicted Functional Partners:
BRCA2
BRCA2 DNA repair associated.
    
 0.910
G3SZQ3_LOXAF
Cor1 domain-containing protein.
  
  
 
0.902
G3TF56_LOXAF
Cor1 domain-containing protein.
  
  
 
0.900
OGFOD1
2-oxoglutarate and iron dependent oxygenase domain containing 1.
   
 
 0.701
REC8
REC8 meiotic recombination protein.
    
 0.495
STAG3
Stromal antigen 3.
    
 0.492
RPS23
Ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
    
 0.448
SYCP2
Synaptonemal complex protein 2.
    
 0.447
SYCE1
Synaptonemal complex central element protein 1.
     
 0.441
SYCE3
Synaptonemal complex central element protein 3.
     
 0.440
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.