STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPACA9Sperm acrosome associated 9. (226 aa)    
Predicted Functional Partners:
CFAP77
Cilia and flagella associated protein 77.
   
 
 0.605
ANKRD29
Ankyrin repeat domain 29.
    
 
 0.597
FAM183A
Family with sequence similarity 183 member A.
   
 
 0.579
CCDC173
Coiled-coil domain containing 173.
    
 
 0.561
SERPINE3
Serpin family E member 3; Belongs to the serpin family.
      
 0.557
EFHC1
EF-hand domain containing 1.
   
   0.554
EFHC2
EF-hand domain containing 2.
   
   0.534
C9orf116
Chromosome 9 open reading frame 116.
   
   0.534
C1orf194
Chromosome 1 open reading frame 194.
   
   0.533
CFAP126
Cilia and flagella associated protein 126.
   
   0.533
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.