STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RRBP1Ribosome binding protein 1. (806 aa)    
Predicted Functional Partners:
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.686
SYNJ2BP-COX16
SYNJ2BP-COX16 readthrough.
    
 0.600
SPCS2
Signal peptidase complex subunit 2.
   
 
 0.548
CMC2
COX assembly mitochondrial protein.
      
 0.521
RANBP2
RAN binding protein 2.
    
 0.516
ZWINT
ZW10 interacting kinetochore protein.
    
   0.514
LEMD2
LEM domain containing 2.
   
 0.501
PRSS8
Uncharacterized protein; Belongs to the peptidase S1 family.
    
 0.487
CATSPERE
Catsper channel auxiliary subunit epsilon.
    
 0.465
KDM6A
Lysine demethylase 6A.
   
 0.444
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.