STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LARP7La ribonucleoprotein domain family member 7. (578 aa)    
Predicted Functional Partners:
MEPCE
Methylphosphate capping enzyme.
    
 0.974
CDK9
Cyclin dependent kinase 9; Belongs to the protein kinase superfamily.
   
 0.920
CCNT1
Cyclin T1; Belongs to the cyclin family.
   
 0.876
HEXIM1
HEXIM P-TEFb complex subunit 1.
    
 0.807
CCNT2
Cyclin T2; Belongs to the cyclin family.
   
 0.758
HEXIM2
HEXIM P-TEFb complex subunit 2.
    
 
 0.711
SART3
Spliceosome associated factor 3, U4/U6 recycling protein.
   
 0.631
DDX18
RNA helicase.
   
 0.605
LYAR
Ly1 antibody reactive.
   
 
 0.604
DDX21
DExD-box helicase 21.
   
 0.569
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.