STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PYGO1Pygopus family PHD finger 1. (403 aa)    
Predicted Functional Partners:
CTNNB1
Catenin beta 1.
   
 0.849
BCL9
BCL9 transcription coactivator.
    
 0.838
BCL9L
Uncharacterized protein.
    
 0.805
JUP
Junction plakoglobin.
   
 0.761
ASH2L
ASH2 like, histone lysine methyltransferase complex subunit.
    
 0.728
RBBP5
RB binding protein 5, histone lysine methyltransferase complex subunit.
    
 0.725
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.686
LEF1
Lymphoid enhancer binding factor 1.
    
 0.614
TCF7
Transcription factor 7.
    
 0.600
MEN1
Menin 1.
    
  0.571
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.