STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PJVKPejvakin. (352 aa)    
Predicted Functional Partners:
GZMA
Granzyme A; Belongs to the peptidase S1 family.
     
 0.672
G3UER8_LOXAF
Peptidase S1 domain-containing protein.
     
 0.672
KCNQ4
Potassium voltage-gated channel subfamily Q member 4; Belongs to the potassium channel family.
      
 0.577
OSBPL3
Oxysterol-binding protein; Belongs to the OSBP family.
 
    
 0.572
PCDH15
Protocadherin related 15.
      
 0.528
TRIOBP
PH domain-containing protein.
     
 0.528
G3SNS3_LOXAF
Uncharacterized protein.
      
 0.523
SLC26A5
Prestin; Motor protein that converts auditory stimuli to length changes in outer hair cells and mediates sound amplification in the mammalian hearing organ; Belongs to the SLC26A/SulP transporter (TC 2.A.53) family.
      
 0.521
OTOF
Otoferlin.
      
 0.509
TMC1
Transmembrane channel-like protein.
      
 0.484
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.