STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DNASE2Deoxyribonuclease 2, lysosomal. (354 aa)    
Predicted Functional Partners:
DNASE2B
Deoxyribonuclease 2 beta.
  
  
0.907
SPATA48
Uncharacterized protein.
      
 0.589
GNS
N-acetylglucosamine-6-sulfatase; Belongs to the sulfatase family.
   
 0.541
SKIV2L
Ski2 like RNA helicase.
      
 0.524
RNASEH2C
Ribonuclease H2 subunit C.
      
 0.518
BLOC1S1
Uncharacterized protein.
   
 
  0.516
G3U6L4_LOXAF
Uncharacterized protein; Belongs to the peptidase S1 family.
   
  
 0.507
CTSZ
Cathepsin Z; Belongs to the peptidase C1 family.
   
 
 0.476
TXNDC5
Thioredoxin domain containing 5; Belongs to the protein disulfide isomerase family.
    
  0.454
DFFB
DNA fragmentation factor subunit beta.
      
 0.448
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.