Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| MED1 | NCOA1 | ENSLAFP00000000953 | ENSLAFP00000012099 | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Nuclear receptor coactivator. | 0.739 |
| MED1 | NCOR1 | ENSLAFP00000000953 | ENSLAFP00000028513 | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Nuclear receptor corepressor 1. | 0.554 |
| MED1 | NCOR2 | ENSLAFP00000000953 | ENSLAFP00000017389 | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Nuclear receptor corepressor 2. | 0.621 |
| MED1 | RARA | ENSLAFP00000000953 | ENSLAFP00000013626 | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Retinoic acid receptor alpha. | 0.651 |
| MED1 | RXRA | ENSLAFP00000000953 | ENSLAFP00000020688 | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Retinoid X receptor alpha. | 0.740 |
| MED1 | RXRB | ENSLAFP00000000953 | ENSLAFP00000019323 | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Retinoid X receptor beta. | 0.717 |
| MED1 | RXRG | ENSLAFP00000000953 | ENSLAFP00000006754 | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Retinoid X receptor gamma. | 0.905 |
| NCOA1 | MED1 | ENSLAFP00000012099 | ENSLAFP00000000953 | Nuclear receptor coactivator. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.739 |
| NCOA1 | NCOR1 | ENSLAFP00000012099 | ENSLAFP00000028513 | Nuclear receptor coactivator. | Nuclear receptor corepressor 1. | 0.649 |
| NCOA1 | NCOR2 | ENSLAFP00000012099 | ENSLAFP00000017389 | Nuclear receptor coactivator. | Nuclear receptor corepressor 2. | 0.627 |
| NCOA1 | RARA | ENSLAFP00000012099 | ENSLAFP00000013626 | Nuclear receptor coactivator. | Retinoic acid receptor alpha. | 0.593 |
| NCOA1 | RXRA | ENSLAFP00000012099 | ENSLAFP00000020688 | Nuclear receptor coactivator. | Retinoid X receptor alpha. | 0.850 |
| NCOA1 | RXRB | ENSLAFP00000012099 | ENSLAFP00000019323 | Nuclear receptor coactivator. | Retinoid X receptor beta. | 0.719 |
| NCOA1 | RXRG | ENSLAFP00000012099 | ENSLAFP00000006754 | Nuclear receptor coactivator. | Retinoid X receptor gamma. | 0.945 |
| NCOR1 | MED1 | ENSLAFP00000028513 | ENSLAFP00000000953 | Nuclear receptor corepressor 1. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.554 |
| NCOR1 | NCOA1 | ENSLAFP00000028513 | ENSLAFP00000012099 | Nuclear receptor corepressor 1. | Nuclear receptor coactivator. | 0.649 |
| NCOR1 | NCOR2 | ENSLAFP00000028513 | ENSLAFP00000017389 | Nuclear receptor corepressor 1. | Nuclear receptor corepressor 2. | 0.920 |
| NCOR1 | RARA | ENSLAFP00000028513 | ENSLAFP00000013626 | Nuclear receptor corepressor 1. | Retinoic acid receptor alpha. | 0.741 |
| NCOR1 | RXRA | ENSLAFP00000028513 | ENSLAFP00000020688 | Nuclear receptor corepressor 1. | Retinoid X receptor alpha. | 0.737 |
| NCOR1 | RXRB | ENSLAFP00000028513 | ENSLAFP00000019323 | Nuclear receptor corepressor 1. | Retinoid X receptor beta. | 0.737 |
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