STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SONSON DNA binding protein. (2352 aa)    
Predicted Functional Partners:
PRRC2C
Proline rich coiled-coil 2C.
   
   0.944
RBM23
RNA binding motif protein 23.
   
 0.853
RBM39
RNA binding motif protein 39.
   
 0.853
DDX5
DEAD-box helicase 5; Belongs to the DEAD box helicase family.
   
 0.752
SRSF11
Serine and arginine rich splicing factor 11.
   
 
 0.741
SETD2
SET domain containing 2, histone lysine methyltransferase.
   
 0.700
TYW3
tRNA-yW synthesizing protein 3 homolog.
      
 0.694
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.686
PRPF4B
Pre-mRNA processing factor 4B.
   
  
0.666
RANBP2
RAN binding protein 2.
   
 0.658
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.