Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CRYZL1 | DONSON | ENSLAFP00000013706 | ENSLAFP00000013702 | Crystallin zeta like 1. | Downstream neighbor of SON. | 0.633 |
DONSON | CRYZL1 | ENSLAFP00000013702 | ENSLAFP00000013706 | Downstream neighbor of SON. | Crystallin zeta like 1. | 0.633 |
DONSON | GART | ENSLAFP00000013702 | ENSLAFP00000013687 | Downstream neighbor of SON. | Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family. | 0.789 |
DONSON | MCM2 | ENSLAFP00000013702 | ENSLAFP00000008479 | Downstream neighbor of SON. | DNA helicase; Belongs to the MCM family. | 0.688 |
DONSON | MRPS6 | ENSLAFP00000013702 | ENSLAFP00000016024 | Downstream neighbor of SON. | Mitochondrial ribosomal protein S6. | 0.651 |
DONSON | ORC1 | ENSLAFP00000013702 | ENSLAFP00000003139 | Downstream neighbor of SON. | Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. | 0.777 |
DONSON | POLA2 | ENSLAFP00000013702 | ENSLAFP00000021892 | Downstream neighbor of SON. | DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis. | 0.612 |
DONSON | POLD2 | ENSLAFP00000013702 | ENSLAFP00000017158 | Downstream neighbor of SON. | DNA polymerase delta 2, accessory subunit. | 0.730 |
DONSON | PRIM2 | ENSLAFP00000013702 | ENSLAFP00000005294 | Downstream neighbor of SON. | DNA primase large subunit; Regulatory subunit of the DNA primase complex and component of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which play an essential role in the initiation of DNA synthesis. The primase subunit of the polymerase alpha complex initiates DNA synthesis by oligomerising short RNA primers on both leading and lagging strands. | 0.772 |
DONSON | RFC4 | ENSLAFP00000013702 | ENSLAFP00000020486 | Downstream neighbor of SON. | Replication factor C subunit 4. | 0.576 |
DONSON | SON | ENSLAFP00000013702 | ENSLAFP00000013694 | Downstream neighbor of SON. | SON DNA binding protein. | 0.580 |
GART | DONSON | ENSLAFP00000013687 | ENSLAFP00000013702 | Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family. | Downstream neighbor of SON. | 0.789 |
GART | MRPS6 | ENSLAFP00000013687 | ENSLAFP00000016024 | Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family. | Mitochondrial ribosomal protein S6. | 0.790 |
MCM2 | DONSON | ENSLAFP00000008479 | ENSLAFP00000013702 | DNA helicase; Belongs to the MCM family. | Downstream neighbor of SON. | 0.688 |
MCM2 | ORC1 | ENSLAFP00000008479 | ENSLAFP00000003139 | DNA helicase; Belongs to the MCM family. | Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. | 0.999 |
MCM2 | POLA2 | ENSLAFP00000008479 | ENSLAFP00000021892 | DNA helicase; Belongs to the MCM family. | DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis. | 0.914 |
MCM2 | POLD2 | ENSLAFP00000008479 | ENSLAFP00000017158 | DNA helicase; Belongs to the MCM family. | DNA polymerase delta 2, accessory subunit. | 0.594 |
MCM2 | PRIM2 | ENSLAFP00000008479 | ENSLAFP00000005294 | DNA helicase; Belongs to the MCM family. | DNA primase large subunit; Regulatory subunit of the DNA primase complex and component of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which play an essential role in the initiation of DNA synthesis. The primase subunit of the polymerase alpha complex initiates DNA synthesis by oligomerising short RNA primers on both leading and lagging strands. | 0.962 |
MCM2 | RFC4 | ENSLAFP00000008479 | ENSLAFP00000020486 | DNA helicase; Belongs to the MCM family. | Replication factor C subunit 4. | 0.869 |
MRPS6 | DONSON | ENSLAFP00000016024 | ENSLAFP00000013702 | Mitochondrial ribosomal protein S6. | Downstream neighbor of SON. | 0.651 |
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