STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZCCHC8Zinc finger CCHC-type containing 8. (705 aa)    
Predicted Functional Partners:
RBM7
RRM domain-containing protein.
    
 
 0.978
MTREX
Mtr4 exosome RNA helicase.
    
 0.970
SNX15
Sorting nexin 15.
      
 0.723
EXOSC3
Exosome component 3.
   
 
 0.704
EXOSC8
Exosome component 8.
    
 
 0.629
EXOSC7
Exosome component 7.
   
 
 0.600
ZCCHC7
Uncharacterized protein.
      
 0.587
SF3B4
Splicing factor 3b subunit 4.
      
 0.585
RSRC2
Arginine and serine rich coiled-coil 2.
 
 
  
 0.568
ZFC3H1
Zinc finger C3H1-type containing.
      
 0.564
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.