STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GPATCH3G-patch domain containing 3. (524 aa)    
Predicted Functional Partners:
ZNF408
Zinc finger protein 408.
   
    0.944
EFCAB1
EF-hand calcium binding domain 1.
      
 0.696
RSPRY1
Ring finger and SPRY domain containing 1.
      
 0.695
EAF1
ELL associated factor 1.
      
 0.694
ENTPD3
Ectonucleoside triphosphate diphosphohydrolase 3; Belongs to the GDA1/CD39 NTPase family.
      
 0.683
PLEKHA8
Pleckstrin homology domain containing A8.
   
  
 0.645
FKBP14
Peptidylprolyl isomerase.
    
 
 0.632
METTL6
Methyltransferase-like protein; Belongs to the methyltransferase superfamily. METL family.
      
 0.596
GARS1
Glycyl-tRNA synthetase.
      
 0.595
CDK14
Cyclin dependent kinase 14; Belongs to the protein kinase superfamily.
      
 0.566
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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