STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPMCarboxypeptidase M. (443 aa)    
Predicted Functional Partners:
GAK
Cyclin G associated kinase.
    
  0.948
YEATS4
YEATS domain containing 4.
      
 0.813
NUP107
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
      
 0.658
C12orf71
Chromosome 12 open reading frame 71.
      
 0.624
FRS2
Fibroblast growth factor receptor substrate 2.
   
  
 0.559
SPRYD4
SPRY domain containing 4.
      
 0.496
DNAJC6
DnaJ heat shock protein family (Hsp40) member C6.
    
  0.480
PREP
Prolyl endopeptidase.
      
 0.446
LYZL4
Lysozyme like 4; Belongs to the glycosyl hydrolase 22 family.
      
 0.433
BDKRB1
Bradykinin receptor B1.
      
 0.420
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.