STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDCCAG8Uncharacterized protein. (390 aa)    
Predicted Functional Partners:
IQCB1
IQ motif containing B1.
    
 
 0.668
OFD1
OFD1 centriole and centriolar satellite protein.
    
 
 0.648
PLK1
Serine/threonine-protein kinase PLK.
   
 0.593
NIN
Uncharacterized protein.
    
 
 0.533
PPIG
Peptidylprolyl isomerase G.
    
 
 0.525
NPHP1
Nephrocystin 1.
   
 0.507
CEP290
Centrosomal protein 290.
      
 0.483
PLK3
Polo like kinase 3.
   
 0.466
PLK2
Serine/threonine-protein kinase PLK.
   
 0.466
G3UHW2_LOXAF
Uncharacterized protein.
   
 0.466
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.