STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPNA6Importin subunit alpha; Functions in nuclear protein import. (544 aa)    
Predicted Functional Partners:
KPNB1
Karyopherin subunit beta 1.
   
 0.886
KPNA1
Importin subunit alpha; Functions in nuclear protein import.
  
 
0.709
RANBP2
RAN binding protein 2.
   
 
 0.666
CSE1L
Chromosome segregation 1 like.
   
 
 0.653
YARS1
Tyrosine--tRNA ligase.
   
  
 0.630
NCBP1
Nuclear cap binding protein subunit 1.
   
 
 0.609
NUP153
Nucleoporin 153.
   
 
 0.605
RCC1
Regulator of chromosome condensation 1.
   
 
 0.601
G3UMY7_LOXAF
Uncharacterized protein.
   
 
 0.584
NUP50
Nucleoporin 50.
   
 
 0.582
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.