STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABCF1ATP binding cassette subfamily F member 1. (839 aa)    
Predicted Functional Partners:
ABCE1
ATP binding cassette subfamily E member 1.
   
 
 0.824
MRPL20
Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family.
  
 
 0.789
EIF2S1
Eukaryotic translation initiation factor 2 subunit alpha.
   
 0.779
MRPL27
Mitochondrial ribosomal protein L27.
  
 
 0.772
TCF19
Transcription factor 19.
  
  
 0.765
GCN1
GCN1 activator of EIF2AK4.
   
 
 0.759
RPL11
Ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
   
 
 0.742
MRPL21
Mitochondrial ribosomal protein L21.
  
   0.727
RPS3
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 
 0.722
RPL23
Ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
   
 
 0.721
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.