STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VNN1CN hydrolase domain-containing protein. (511 aa)    
Predicted Functional Partners:
PANK1
Pantothenate kinase 1.
     
 0.901
PANK2
Pantothenate kinase 2.
     
 0.900
G3TT93_LOXAF
CN hydrolase domain-containing protein.
  
  
 
0.900
PANK3
Pantothenate kinase 3.
     
 0.900
STX7
Syntaxin 7; Belongs to the syntaxin family.
   
  
 0.686
TAAR8
Trace amine associated receptor 8; Belongs to the G-protein coupled receptor 1 family.
 
    
 0.623
QPRT
Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Involved in the catabolism of quinolinic acid (QA). Belongs to the NadC/ModD family.
  
 
 0.570
SMS
Spermine synthase.
  
 
 0.540
SRM
Spermidine synthase; Belongs to the spermidine/spermine synthase family.
  
 
 0.540
NUDT15
Nudix hydrolase 15; Belongs to the Nudix hydrolase family.
    
 0.522
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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