STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATG14Autophagy related 14. (492 aa)    
Predicted Functional Partners:
PIK3R4
Phosphoinositide-3-kinase regulatory subunit 4.
    
 0.998
PIK3C3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 0.998
NRBF2
Nuclear receptor binding factor 2.
    
 0.997
RB1CC1
ATG11 domain-containing protein.
   
 0.994
BECN1
Beclin 1.
    
 0.992
BECN2
Beclin 2.
    
 0.992
ATG101
Autophagy related 101.
    
 0.990
ULK2
Protein kinase domain-containing protein.
    
 0.981
STX17
Syntaxin 17; Belongs to the syntaxin family.
   
 0.979
SNAP29
Synaptosome associated protein 29.
    
 0.975
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.