STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PUS7Pseudouridine synthase 7. (673 aa)    
Predicted Functional Partners:
RPUSD2
RNA pseudouridine synthase domain containing 2.
    
 
 0.846
PUS3
Pseudouridine synthase 3.
   
 
 0.826
NSUN2
NOP2/Sun RNA methyltransferase 2; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
   
 
 0.814
NOC3L
Nucleolar complex protein 3 homolog.
   
   0.793
RBM28
RNA binding motif protein 28.
   
    0.788
UTP4
UTP4 small subunit processome component.
   
    0.781
TBL3
Transducin beta like 3.
   
    0.773
PUS1
Pseudouridine synthase 1.
   
 
 0.771
TRUB1
TruB pseudouridine synthase family member 1.
   
  
 0.764
RPF2
Ribosome production factor 2 homolog.
   
    0.764
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.