STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMC4Transmembrane channel-like protein. (706 aa)    
Predicted Functional Partners:
MBOAT7
Membrane bound O-acyltransferase domain containing 7; Belongs to the membrane-bound acyltransferase family.
 
    
 0.790
COMTD1
Catechol-O-methyltransferase domain containing 1.
   
  
 0.589
DUS2
Dihydrouridine synthase 2.
   
  
 0.588
PAXBP1
PAX3 and PAX7 binding protein 1.
      
 0.587
COPRS
Coordinator of PRMT5 and differentiation stimulator.
      
 0.583
PARL
Uncharacterized protein.
      
 0.577
LENG1
Leukocyte receptor cluster member 1.
 
 
  
 0.547
PRPF31
Pre-mRNA processing factor 31.
    
 
 0.532
NDUFA3
NADH:ubiquinone oxidoreductase subunit A3.
      
 0.491
CAMK1G
Calcium/calmodulin dependent protein kinase IG; Belongs to the protein kinase superfamily.
   
  
 0.488
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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