STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CD44CD44 molecule (Indian blood group). (787 aa)    
Predicted Functional Partners:
RDX
Radixin.
   
 
 0.939
SPP1
Secreted phosphoprotein 1.
   
 0.915
MMP9
Matrix metallopeptidase 9.
   
 0.913
EGFR
Receptor protein-tyrosine kinase.
    
 
 0.852
CD74
CD74 molecule.
   
 0.847
MSN
Moesin.
   
 
 0.844
EZR
Ezrin.
   
 
 0.835
HMMR
Hyaluronan mediated motility receptor.
   
 
 0.813
ERBB2
Receptor protein-tyrosine kinase.
    
 
 0.805
SLC7A11
Solute carrier family 7 member 11.
    
 
 0.775
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.